Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PCPG rs73190167 chr7:105160418 A/G 5.12E-5 178 20.2 29.43 2.28 KM Plot
PCPG rs73190169 chr7:105160500 A/G 5.12E-5 178 20.2 29.43 2.28 KM Plot
PCPG rs73190172 chr7:105161210 T/C 5.12E-5 178 20.2 29.43 2.28 KM Plot
PCPG rs73190174 chr7:105161216 T/G 5.12E-5 178 20.2 29.43 2.28 KM Plot
PCPG rs73190179 chr7:105162812 C/A 5.12E-5 178 20.2 29.43 2.28 KM Plot
PCPG rs73190181 chr7:105162907 A/C 5.12E-5 178 20.2 29.43 2.28 KM Plot
PCPG rs73190183 chr7:105163022 G/A 5.12E-5 178 20.2 29.43 2.28 KM Plot
PCPG rs73190184 chr7:105163736 C/T 5.12E-5 178 20.2 29.43 2.28 KM Plot
PCPG rs73190186 chr7:105164368 G/C 5.12E-5 178 20.2 29.43 2.28 KM Plot
PCPG rs73190187 chr7:105164401 A/T 5.12E-5 178 20.2 29.43 2.28 KM Plot
PCPG rs73190189 chr7:105164452 G/A 5.12E-5 178 20.2 29.43 2.28 KM Plot
PCPG rs73190193 chr7:105164852 A/G 5.12E-5 178 20.2 29.43 2.28 KM Plot
PCPG rs73190200 chr7:105165856 T/C 5.12E-5 178 20.2 29.43 2.28 KM Plot
PCPG rs73190201 chr7:105165891 A/C 5.12E-5 178 20.2 29.43 2.28 KM Plot
PCPG rs73190202 chr7:105166510 A/G 5.12E-5 178 20.2 29.43 2.28 KM Plot